PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG033880.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 286aa    MW: 31292.5 Da    PI: 4.9575
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG033880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.13.2e-08160204655
                       HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       +++ r RR+ri ++ +eL +l+P         Kl+ ae+L++A +++k Lq
  TRIDC5BG033880.1 160 SAAARERRRRISEKTAELSRLIPGgH------KLNTAEMLQEAARHVKLLQ 204
                       5677999999*************955......****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MSMAPLSFRP TATARPRFHC VDDGADRDVS FLQDVHPDVG DALLGFVYDP LDPAVNAGLD  60
EFLNIPPYGD DDDEDGQQRC AKKPRAGGFE EDSWFDFTAA DGSLAQKWDN ACTQQVPEFL  120
PEFVLPLPPP PPPPPQVYPP FVRGADAKKL QAAGNGSSQS AAARERRRRI SEKTAELSRL  180
IPGGHKLNTA EMLQEAARHV KLLQAQVGML TLLNNIEDEK VPAMAQEHMH ALLVCGGMQE  240
RLAAEGKCLV PKVLVDTIAK DAAVRSNALV NRDLTRFTES LFAEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.14e-20bHLH family protein