PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG036510.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 383aa    MW: 41169.1 Da    PI: 4.8839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG036510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.3e-20121170255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+G+r+++ +g+W+AeIrdps+     r++lg+++taeeAa+a++a ++k++g
  TRIDC5BG036510.1 121 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYDTAEEAARAYDAEARKIRG 170
                       69*******.**********965...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MCGGAILAGF IPPSAAAAAA KAAAAKKKQQ QQQRSVTADS LWPGLRKKPA EEEDFEADFR  60
DFERDSNDDD DAVQEVPPPP ATAGFAFAAA AEVALPAPTR LDAIQHDGPA AKSVKRVRKN  120
QYRGIRQRPW GKWAAEIRDP SKGVRVWLGT YDTAEEAARA YDAEARKIRG KKAKVNFPEE  180
APAVQKSTLK PTAAKSAKLA PPPKACEDEP FNHLSRGDND LFAMFAFNDK KVSAKPAESV  240
DSLLPVKPLV PTETFGMNML SDQSSNSFGS TDFGWDDEAM TPDYTSVFVP NAAAMPAYGE  300
PAYLQGGAPK RMRNNFGVAV LPQGNGAQDI PAFDHEMKYS LPYVESSSDG SMDSLLLNGA  360
MQDGASSGDL WSLDELFMAA GGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.34e-29ERF family protein