PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG036780.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 124aa MW: 13322.7 Da PI: 8.5047

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG036780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.5e-05	30	52	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F ++ L H++ H TRIDC5BG036780.1 30 FTCTYCDKKFYSSQALGGHQNAH 52 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence
MESNGGEGEC DIDLNLSLHR ASSPEPLGYF TCTYCDKKFY SSQALGGHQN AHKFERSVAK 60 RTRELAAARR HGHAGRVGAG EEGSRGGKDP TSNAAGSSSH RRVSPPAAAR RDLITEEIDL 120 SLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	4e-16	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG036780.1