PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG036820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 152aa MW: 16476.4 Da PI: 7.6286

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG036820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00028	37	57	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C +C++ F+++ L H++ H TRIDC5BG036820.1 37 CVYCDRKFRSSQALGGHQNAH 57 ******************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
MEQLNWEQDE QELSLELTLR MTWAAQAEAE QGGFFLCVYC DRKFRSSQAL GGHQNAHKHE 60 RSVAKRRREI AASTRAHGAG GAPAAAQDAR PGGYAGDSDF LSADGRARKT EALKAAPPML 120 AGMARKRGSA PSEYAYGAFE HVAGEVDLSL RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	6e-14	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG036820.1