PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG036820.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 103aa MW: 11650 Da PI: 8.2532

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG036820.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	32	52	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C +C++ F+++ L H++ H TRIDC5BG036820.2 32 CVYCDRKFRSSQALGGHQNAH 52 ******************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence
WEQDEQELSL ELTLRMTWAA QAEAEQGGFF LCVYCDRKFR SSQALGGHQN AHKHERSVAK 60 RRREIAASTR AHGMARKRGS APSEYAYGAF EHVAGEVDLS LRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	2e-14	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG036820.2