PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG038590.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 345aa    MW: 36002.1 Da    PI: 5.2661
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG038590.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.17.6e-14130176354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       r+h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++ e++k+L
  TRIDC5BG038590.1 130 RSHSEAERRRRQRINGHLARLRSLLPNT-----TKTDKASLLAEVLEHVKEL 176
                       78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
PRSQPSAADG DMWEGGVHGS HQDAARLLPP WLGGGPAAFA DPVGTAVGSG FGVGGYACDV  60
VGQAGGVFGF GFEAAVVAAQ QQHHQQRAAE AAAAGGSKAV VSGLLGSLQA ELGRMNAGEI  120
MDAKALAASR SHSEAERRRR QRINGHLARL RSLLPNTTKT DKASLLAEVL EHVKELKRQT  180
SAMTMMAAAV GGDEDDNAAP VQMLPTEADE LSVDAAEDGE GRLVVRASLC CEDRPDLIPD  240
IIRALAALRL RAHRAEITTL GGRVRSVLLI TAEEGEEGGD EGGDGIDEEC TASHWRHECI  300
ASVQEALRGV MDRRAACSND TSSSGGGGSI KRQRMNYGAH EQCSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-51bHLH family protein