PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG039650.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 187aa    MW: 20339.2 Da    PI: 11.703
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG039650.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08113153954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  TRIDC5BG039650.3 113 ARLRRERISERIRVLQRLVPGG-----TKMDTASMLDEAIHYVKFL 153
                       699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
ASAGAGAQRP VDDDGGDVAA DIARADPLAK PLASAARVDD LRDRRRQLFL PSGPADPGRR  60
GGVRRHRRRA PGAMREMIFH IAALQPVEVD PEAVRPPKRR NVRTSKDPQS VAARLRRERI  120
SERIRVLQRL VPGGTKMDTA SMLDEAIHYV KFLKSQVQSL ELAAAATGAA AHRAAAFAYP  180
ALQHAPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195100RPPKRR
2114119RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.12e-39bHLH family protein