PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG039670.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 388aa MW: 41425.4 Da PI: 8.6882

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG039670.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.7	5e-35	26	119	2	103
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k+y++++d+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv e+ weF+++ F+kg+k+l TRIDC5BG039670.1 26 FLTKTYQLVDDPATDHIVSWGdDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPER---------WEFANEFFRKGEKQL 109 9******************6667*************************************999.........*********** PP XXXXXXXXXX CS HSF_DNA-bind 94 lekikrkkse 103 l++i+r+k++ TRIDC5BG039670.1 110 LCEIHRRKTS 119 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MERCGSWSES DAAAQAAAQK AVPAPFLTKT YQLVDDPATD HIVSWGDDRV STFVVWRPPE 60 FARDILPNYF KHNNFSSFVR QLNTYGFRKV VPERWEFANE FFRKGEKQLL CEIHRRKTSG 120 STTSSSPPPF FAPPHFPLFH PGVSVAHHHQ QFVGEDGPMA AHAGMGVPFM QPHWREQGAP 180 RLLALGGPAA PSPGADGNGR ASSAAVLMDE NERLRRSNTA LLQELSHMRK LYNDIIYFVQ 240 NHVRPVAPSP AAATFLQGLG NGMQPRKMPP ASTGAGNGLN TSGGSTTSSS SLTIADELSP 300 PPNHLSAEKS GGEAGSSSAA LSAPTKLFGV HLSAAPVGAG SKRPPSPQEE LPSTPPATKA 360 RLALESDDLS LSVAPPSQPY AASSPARS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MERCGSWSES DAAAQAAAQK AVPAPFLTKT YQLVDDPATD HIVSWGDDRV STFVVWRPPE  60
FARDILPNYF KHNNFSSFVR QLNTYGFRKV VPERWEFANE FFRKGEKQLL CEIHRRKTSG  120
STTSSSPPPF FAPPHFPLFH PGVSVAHHHQ QFVGEDGPMA AHAGMGVPFM QPHWREQGAP  180
RLLALGGPAA PSPGADGNGR ASSAAVLMDE NERLRRSNTA LLQELSHMRK LYNDIIYFVQ  240
NHVRPVAPSP AAATFLQGLG NGMQPRKMPP ASTGAGNGLN TSGGSTTSSS SLTIADELSP  300
PPNHLSAEKS GGEAGSSSAA LSAPTKLFGV HLSAAPVGAG SKRPPSPQEE LPSTPPATKA  360
RLALESDDLS LSVAPPSQPY AASSPARS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	3e-58	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG039670.1