PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG039670.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 277aa    MW: 30044.7 Da    PI: 9.8984
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG039670.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.62.6e-35121052103
                       HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
      HSF_DNA-bind   2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 
                       Fl+k+y++++d+++++++sw  ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv  e+         weF+++ F+kg+k+l
  TRIDC5BG039670.2  12 FLTKTYQLVDDPATDHIVSWGdDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPER---------WEFANEFFRKGEKQL 95 
                       9********************6667*****************************************999.........*************** PP

                       XXXXXXXXXX CS
      HSF_DNA-bind  94 lekikrkkse 103
                       l++i+r+k++
  TRIDC5BG039670.2  96 LCEIHRRKTS 105
                       *******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
QAAAQKAVPA PFLTKTYQLV DDPATDHIVS WGDDRVSTFV VWRPPEFARD ILPNYFKHNN  60
FSSFVRQLNT YGFRKVVPER WEFANEFFRK GEKQLLCEIH RRKTSGSTTS SSPPPFFAPP  120
HFPLFHPGPH WREQGAPRLL ALGGPAAPSP GADGNGRASS AAVLMDENER LRRSNTALLQ  180
ELSHMRKLYN DIIYFVQNHV RPVAPSPAAA TFLQGLGNGM QPRKMPPAST GAGNGLNTSG  240
GSTTSSSSLT IADELSPPPN HLSAEKSGGE AGSSSAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.11e-62HSF family protein