PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG039670.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 294aa    MW: 31831.5 Da    PI: 8.7053
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG039670.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.52.9e-35261192103
                       HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
      HSF_DNA-bind   2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 
                       Fl+k+y++++d+++++++sw  ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv  e+         weF+++ F+kg+k+l
  TRIDC5BG039670.3  26 FLTKTYQLVDDPATDHIVSWGdDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPER---------WEFANEFFRKGEKQL 109
                       9********************6667*****************************************999.........*************** PP

                       XXXXXXXXXX CS
      HSF_DNA-bind  94 lekikrkkse 103
                       l++i+r+k++
  TRIDC5BG039670.3 110 LCEIHRRKTS 119
                       *******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MERCGSWSES DAAAQAAAQK AVPAPFLTKT YQLVDDPATD HIVSWGDDRV STFVVWRPPE  60
FARDILPNYF KHNNFSSFVR QLNTYGFRKV VPERWEFANE FFRKGEKQLL CEIHRRKTSG  120
STTSSSPPPF FAPPHFPLFH PGVSVAHHHQ QEQGAPRLLA LGGPAAPSPG ADGNGRASSA  180
AVLMDENERL RRSNTALLQE LSHMRKLYND IIYFVQNHVR PVAPSPAAAT FLQGLGNGMQ  240
PRKMPPASTG AGNGLNTSGG STTSSSSLTI ADELSPPPNH LSAEKSGGEA GSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.13e-59HSF family protein