PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG039720.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 298aa    MW: 32228.4 Da    PI: 9.4869
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG039720.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind104.11.2e-32301212102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+++++e++ ++e+iswse+g+sfvv+++ e+a+++Lp +Fkh nf+SFvRQLn+YgF+kv  ++         weF++++F++g+++ll
  TRIDC5BG039720.2  30 FLTKTHQMVEERGTDEVISWSEHGRSFVVWKPVELARDLLPLHFKHCNFSSFVRQLNTYGFRKVVPDR---------WEFANENFRRGEQSLL 113
                       9*****************************************************************99.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       + i+r+k 
  TRIDC5BG039720.2 114 SGIRRRKA 121
                       ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAGAAAQQQQ KGGGGGGGVV RVGGGGPAPF LTKTHQMVEE RGTDEVISWS EHGRSFVVWK  60
PVELARDLLP LHFKHCNFSS FVRQLNTYGF RKVVPDRWEF ANENFRRGEQ SLLSGIRRRK  120
ATATTTPQSS KTCGTGVNVA FPWPLPVLPP ASVSTSGTGN DHSTSSASSP TRPDLSSENE  180
QLRKDNHALA AELALARRHC EELLGFLSRF LDVRQLDLRL LMDGDMQGAA GGARSADQEH  240
CCEKKVKLFG VILKDASARK RGRCDEAAAS ERSMKMTRIG EPWVGVPSSC PARCGGGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.13e-52HSF family protein