PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG039790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 248aa    MW: 26296.3 Da    PI: 6.6201
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG039790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-20111160255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+W+AeIrdp+    r  r +lg+f+tae+Aa+a++ a+++++g
  TRIDC5BG039790.1 111 VYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEDAARAYDLAALEFRG 160
                       69*******.**********82....48*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
RPGHIAMAMA TANQDGAATF HDHRGGTAAT ELHGRTISSE QEHGIIVAAL RHVVSGYTTA  60
PPEVVVAVAC GRCGIDGCLG CDFFGATEPE AVAVAVPVGG VQRKRRRKKN VYRGVRQRPW  120
GKWAAEIRDP RRAVRKWLGT FDTAEDAARA YDLAALEFRG PRARLNFPCS DEPLPGHGSD  180
NGGGGTGAAP QNETLTTPSP CSTDAGQRTP GEWQLGADGA GDQVWEGLQD LMTIDGQDPW  240
FAPFSSPA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103107RKRRR
2103109RKRRRKK
3103110RKRRRKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-22ERF family protein