PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG040560.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 201aa    MW: 21809.5 Da    PI: 8.2592
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG040560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.5e-132470354
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      r+h+e+Er+RR+riN+ +++Lr+llP+a       ++Ka+ L ++v+++++L
  TRIDC5BG040560.1 24 RSHSEAERKRRQRINTHLATLRSLLPSA-----SQMDKAALLGEVVRHVREL 70
                      78*************************9.....68**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
EPEEAEVEMD DQRSPPVRGA RTSRSHSEAE RKRRQRINTH LATLRSLLPS ASQMDKAALL  60
GEVVRHVREL RGDADGGAVA GVAVPGESDE VGVEEERWDA RESAKRVRAW VCCADRPGLM  120
SELGRAVRSV SARAVRAEIA TVGGRTRSVL ELEAGQATDA SRPALHAALR AVLLSREDQL  180
LAVEGYKRQR FSALISQGLG S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13035ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.15e-24bHLH family protein