PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG040970.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 315aa MW: 33285.2 Da PI: 4.973

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG040970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45	2e-14	98	149	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ TRIDC5BG040970.1 98 QRMTHIAVERNRRKQMNEYLAALRSLMPPS---YAQRGDQASIVGGAINFVKELE 149 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
NGLFGGGEGL AGLDGGDWDA AAAAAFSSML LPQAAFQELD ISAVAAATAP QEESVGGGEM 60 SAAGVGQDDA APVAAAATGR RKRRRTRTAK NSEEVESQRM THIAVERNRR KQMNEYLAAL 120 RSLMPPSYAQ RGDQASIVGG AINFVKELEQ LLQTLETHRR TREPAAAVDG GEAPPPPFAN 180 FFTFPQYSMS ATSAPAPPPA TDEGEGADGC PGAEASGSKP SAVADVEVTM VESHANLRML 240 SRRRPRQLLR LLVGLQGHRL TVLHLNMSSA GHMVLYSLSL KVEDDCQLTS VDEIATAAHQ 300 IVEKSQEEQE LTVAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	85	RKRRR
2	81	86	RKRRRT
3	99	110	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	5e-44	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG040970.1