PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG041210.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 258aa    MW: 28425.2 Da    PI: 6.0479
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG041210.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.95.8e-12179257189
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +fYn Y+ e GF +r +ksk +  n++  +++ vC + gk+  e+++         + r++C a +++ ++kd+ w++++ +  HnH+l
  TRIDC5BG041210.2 179 DFYNLYSWEKGFGIRYRKSKLN-VNRTKCMQEIVCGCAGKPIVENTR---------SCRCECSAVIRLLRTKDNGWYIEEHRDGHNHAL 257
                       6***************999988.566678899*******99887555.........99*****************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MQWLGDSVDK ELKLDLCLTT VGGKVETLTP STASGRSGDL AGVPPTMEFL LQPINRTLLE  60
EVNENNGTME PVRFPVAAPA EIPDPAPAGS SADGQIYRPE ASDGDKVQGS EHSIEQLDPK  120
TPGWTQRVRV GVVAPGRPPC ANRVAALEKT VREFAEHPRD IVMVPKIGTS FDTLGEAYDF  180
YNLYSWEKGF GIRYRKSKLN VNRTKCMQEI VCGCAGKPIV ENTRSCRCEC SAVIRLLRTK  240
DNGWYIEEHR DGHNHALS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.16e-10FAR1 family protein