PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG041240.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 368aa MW: 39622.3 Da PI: 8.0875

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG041240.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	36.6	1.5e-11	203	282	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ evGF +r k ++ ng+ +++ vC + gk+e+e+++ + r + a+l++++++dg w+v++ + H+He+ TRIDC5BG041240.4 203 EFYNLYSWEVGFGIRYGKGMQN-VNGTKCMQEIVCGCAGKPERENSS---------SMRSNYAAMLRLHRTDDGGWYVSENRASHTHEML 282 6**************99988.78889999*****9987666.........8899999**********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
RSCWAKNKLS RDSSWGASCS AWICSCRSPE RQRRRRWTLV AHGAPCVLDG GGDAVPGSAA 60 GSSDSAGGPV SPHVLQLDQG EGGLADGEFS GASCKTFVSG GGDVASGYAT PAVVPHNSVQ 120 SSGRSGAADS CTTFSSGGLV LPSARVGDET PAVVSSCSVQ SLSQSGPASA NTTIRVGWKH 180 RGTEVVVNPV LGTIFDSLAE AYEFYNLYSW EVGFGIRYGK GMQNVNGTKC MQEIVCGCAG 240 KPERENSSSM RSNYAAMLRL HRTDDGGWYV SENRASHTHE MLRTCAEKLH WPSHRHIDTY 300 TRDLVKQLRQ NNVNLGKVYN IIASLFGQME NVPFTKRCLR TFCGKLSKEQ ADDDVRKTMD 360 AFSEIFLL

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

RSCWAKNKLS RDSSWGASCS AWICSCRSPE RQRRRRWTLV AHGAPCVLDG GGDAVPGSAA  60
GSSDSAGGPV SPHVLQLDQG EGGLADGEFS GASCKTFVSG GGDVASGYAT PAVVPHNSVQ  120
SSGRSGAADS CTTFSSGGLV LPSARVGDET PAVVSSCSVQ SLSQSGPASA NTTIRVGWKH  180
RGTEVVVNPV LGTIFDSLAE AYEFYNLYSW EVGFGIRYGK GMQNVNGTKC MQEIVCGCAG  240
KPERENSSSM RSNYAAMLRL HRTDDGGWYV SENRASHTHE MLRTCAEKLH WPSHRHIDTY  300
TRDLVKQLRQ NNVNLGKVYN IIASLFGQME NVPFTKRCLR TFCGKLSKEQ ADDDVRKTMD  360
AFSEIFLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	1e-09	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG041240.4