PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG043800.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 119aa    MW: 13441.7 Da    PI: 10.7247
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG043800.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-134893655
                      HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      +++Er RR +i +++ +L+el+P+      k  + +++L +Av+YIk+Lq
  TRIDC5BG043800.8 48 SIAERVRRTKISERIRKLQELVPNM----EKQTNTSDMLDLAVDYIKELQ 93
                      689*********************6....4679****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
RQLKPQFSLP VGSKPSPEIA AIEKFLQFQD SVPCKIRAKR GCATHPRSIA ERVRRTKISE  60
RIRKLQELVP NMEKQTNTSD MLDLAVDYIK ELQMQVKVMK DGRASCTCAA GRPPRSFAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-53bHLH family protein