PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG045910.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 280aa    MW: 30380.1 Da    PI: 5.6849
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG045910.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-0898145455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i  ++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC5BG045910.2  98 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 145
                       8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
RKAPAAGAGK GKEAASCFAK MGEPTGPDSK KCKIEDETVR PKVEEEAATA TASDGSAGGE  60
RGRKQAKGKG SKSKQPAADE PPRDYVHVRA RRGQATDSHS LAERVRREKI TLKMKMLQDL  120
VPGCNKVIGK ALMLDEIINY VQSLQQQVEF LSMKLSTVNP QLDFDTLSNL LHKDMNQALG  180
PSASTVFPLE SAGTVYPLCD QADLYQSFSS GAMENQCSMG LLDMALPPAP QYPFQKQQDF  240
WEAGAQNGLH MDHEQSQENA GSAPNFDGQL QAADHPEIEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.16e-51bHLH family protein