PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG046390.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 86aa    MW: 9574.8 Da    PI: 9.0043
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG046390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26065.31.5e-203985147
            DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllk 47
                      +CaaCk+lrr+C ++C+lapyfpa++p+++anvh++FGasnv +ll+
  TRIDC5BG046390.1 39 RCAACKYLRRRCGHGCALAPYFPASRPRRYANVHRVFGASNVARLLQ 85
                      6******************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
LTRRSIARSI TMSTAGNEVE PEELQEEEEE EGGGGNPRRC AACKYLRRRC GHGCALAPYF  60
PASRPRRYAN VHRVFGASNV ARLLQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.13e-21LBD family protein