PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG046850.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 213aa    MW: 23568.3 Da    PI: 8.4956
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG046850.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP63.16.6e-202414078
                      EEE-TTTS.SEEETTT--SS--S-STTTT-------S--- CS
               SBP 40 qrfCqqCs.rfhelsefDeekrsCrrrLakhnerrrkkqa 78
                       rfCqqCs rfh l efDe+krsCr+rL++hn+rrrk+q 
  TRIDC5BG046850.4  2 MRFCQQCSsRFHLLAEFDEAKRSCRKRLDGHNRRRRKPQV 41
                      6******55****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
EMRFCQQCSS RFHLLAEFDE AKRSCRKRLD GHNRRRRKPQ VDSMNSGSFM TTQQGLYSNS  60
GTRFASFSAP RPEPSWSGII KSEDSNPYYT TTHQINFAGS SSSYSKEGRR FPFLHEGDQM  120
SFSTGAPALE IPPVCQPLLK AVAPPPPPPP ESSSSNKMFS DGQLTHVLDS DCALSLLSSP  180
ANSSSVDVSR MVRPSEHIPS VPNLQQFGSS SWF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12239KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.15e-18SBP family protein