PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047620.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 222aa    MW: 24396.4 Da    PI: 10.018
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047620.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.22.3e-34161371128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                       lppGfrFhPtd el+ +yL++ + +++l++  vi+ v d    +PwdLp +  +e ++ yfFs+r+    +g r++rat  gyWkatgk+k+v
  TRIDC5BG047620.2  16 LPPGFRFHPTDVELLLQYLRRMALDRPLPA-AVIPVVhDAAMPDPWDLPGA--SEGESAYFFSQRQG---RGGRRRRATG-GYWKATGKEKPV 101
                       79****************************.88999989999*******43..466889****9976...5889999977.************ PP

               NAM  93 lsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++    k+ lvg+k+ L+f++g++    +tdWvmheyrl
  TRIDC5BG047620.2 102 FVQlpvgKRLLVGVKTALAFHRGKS----RTDWVMHEYRL 137
                       **999977778**********6544....79*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEKMRAAGEA PPTQLLPPGF RFHPTDVELL LQYLRRMALD RPLPAAVIPV VHDAAMPDPW  60
DLPGASEGES AYFFSQRQGR GGRRRRATGG YWKATGKEKP VFVQLPVGKR LLVGVKTALA  120
FHRGKSRTDW VMHEYRLAGA ADQNKRANGG SQSSEWVVCR VSMKSRARRS AAGGETTGDH  180
QQEQPSPSPS STSSCVTDHT CHAPDQEEVS SSTSHCQQHP TR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.12e-39NAC family protein