PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047650.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 699aa    MW: 78723 Da    PI: 8.3261
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047650.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.7e-08394438246
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5BG047650.10 394 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 438
                        68*****************************99**********96 PP
2Myb_DNA-binding43.57.4e-14447491248
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          WT+eEd++l+ av+ +G + W ++++ +  gR ++qc +r++k l
  TRIDC5BG047650.10 447 RTWTKEEDLQLLAAVQTYGCN-WQLVSANLV-GRIGNQCSNRYRKTL 491
                        68*****************88.*********.************975 PP
3Myb_DNA-binding44.24.5e-14499544248
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        grW+++Ed++l   vk++ +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5BG047650.10 499 GRWSEDEDKRLMVSVKLFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 544
                        8******************************.************986 PP
4Myb_DNA-binding34.25.8e-11551594246
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5BG047650.10 551 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 594
                        79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 699 aa     Download sequence    
MDFYSDDDSD PDFDEGLQED LDLVRRSCII AGADPDAAVA QASSYLAVPS ATTTAAAAAA  60
AARDGSSDEG EGEEEDEDLA LVRSIRENLH LNKGSPSSPR PICAWPPSDA EDDEEDDLET  120
LRAIQRRFSH YHSGTSTGPL ENMKNEASKG GNDEFIAHRP GEEDAQKKNM NANTQTGFPK  180
AALLLVDALK KNRACQKFIR RKMINIEAKI EVNKDLRDRV KCLMDYQYSC RRSFGKVLCQ  240
KVDPRVRLIS SQKQSAQSAK NKYKMPALLL GPAENPHVEK YKAVLKQFPV SLQKHPWSDI  300
EKDRLAKGIK QQYQEALIKD SMKNGSSSGD FSAVDMAYAL TNTVGNFEAT PEILRSVLPL  360
VNWDFIAAMY LPGRSGAECE SRWLNHDDPL INHNAWTACE EKRLILTVQE KGMHNWINIA  420
VALGTQRTPF QCLARYQRSL NPHILKRTWT KEEDLQLLAA VQTYGCNWQL VSANLVGRIG  480
NQCSNRYRKT LIPERKRVGR WSEDEDKRLM VSVKLFRSGS WNKIAQFVPG RTQSQCSERW  540
RNVLDPDIEH GEWRPEEDSK LLASVHEVGP CWSKIAGAMI PHRTDNMCLR RWKRLCQDEL  600
PLMIAANQVK KSIFQTNFVD RETERPAICP SDFPSLVYSK VDKGDENTVS DQVKKPRKRS  660
RKSSVDNVPP NDPSKSSADA AAVNTTKRKS RKKLSGYGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1654662KKPRKRSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-143MYB family protein