PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047650.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 694aa    MW: 76964.8 Da    PI: 10.0842
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047650.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.6e-08125169246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5BG047650.7 125 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 169
                       68*****************************99**********96 PP
2Myb_DNA-binding43.57.3e-14178222248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         WT+eEd++l+ av+ +G + W ++++ +  gR ++qc +r++k l
  TRIDC5BG047650.7 178 RTWTKEEDLQLLAAVQTYGCN-WQLVSANLV-GRIGNQCSNRYRKTL 222
                       68*****************88.*********.************975 PP
3Myb_DNA-binding44.24.5e-14230275248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l   vk++ +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5BG047650.7 230 GRWSEDEDKRLMVSVKLFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 275
                       8******************************.************986 PP
4Myb_DNA-binding34.25.8e-11282325246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5BG047650.7 282 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 325
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
LGPAENPHVE KYKAVLKQFP VSLQKHPWSD IEKDRLAKGI KQQYQEALIK DSMKNGSSSG  60
DFSAVDMAYA LTNTVGNFEA TPEILRSVLP LVNWDFIAAM YLPGRSGAEC ESRWLNHDDP  120
LINHNAWTAC EEKRLILTVQ EKGMHNWINI AVALGTQRTP FQCLARYQRS LNPHILKRTW  180
TKEEDLQLLA AVQTYGCNWQ LVSANLVGRI GNQCSNRYRK TLIPERKRVG RWSEDEDKRL  240
MVSVKLFRSG SWNKIAQFVP GRTQSQCSER WRNVLDPDIE HGEWRPEEDS KLLASVHEVG  300
PCWSKIAGAM IPHRTDNMCL RRWKRLCQDE LPLMIAANQV KKSIFQTNFV DRETERPAIC  360
PSDFPSLVYS KVDKGDENTV SDQVKKPRKR SRKSSVDNVP PNDPSKSSAD AAAVNTTKRK  420
SRKKLSGIGA ENQTGEDITV SDGVNNSSRG HSRARKRKVT TDGDVVVQTR MRGSISVDNE  480
LTLDILGGPI SFDDEAPTNQ KRDPTSVGKE GTAKKRTRGS VSVGNEGPVK KKMRGSISVG  540
DGRAVKNRMR GSVSIDNQGN TTKRKRVSRK SAKGNSKTDG EVNTCEMDLP SVPSEAAAER  600
GIDTGNTNKM KRKSTPRPKL INMAEGTVDE YSRLADCISF ARGNGTSKNN SVMPINNAMQ  660
SGGPSGENPQ VAISARLDPT SIENGSSPNT QVVD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1385393KKPRKRSRK
2513519AKKRTRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.21e-122MYB family protein