PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047650.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 938aa    MW: 104178 Da    PI: 9.1052
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047650.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.28.1e-08411455246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5BG047650.9 411 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 455
                       68*****************************99**********96 PP
2Myb_DNA-binding431.1e-13464508248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         WT+eEd++l+ av+ +G + W ++++ +  gR ++qc +r++k l
  TRIDC5BG047650.9 464 RTWTKEEDLQLLAAVQTYGCN-WQLVSANLV-GRIGNQCSNRYRKTL 508
                       68*****************88.*********.************975 PP
3Myb_DNA-binding43.76.4e-14516561248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l   vk++ +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5BG047650.9 516 GRWSEDEDKRLMVSVKLFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 561
                       8******************************.************986 PP
4Myb_DNA-binding33.78.3e-11568611246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5BG047650.9 568 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 611
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 938 aa     Download sequence    
MDFYSDDDSD PDFDEGLQED LDLVRRSCII AGADPDAAVA QASSYLAVPS ATTTAAAAAA  60
AARDGSSDEG EGEEEDEDLA LVRSIRENLH LNKGSPSSPR PICAWPPSDA EDDEEDDLET  120
LRAIQRRFSH YHSGESTRDP LLPSSNLDAP GTSTGPLENM KNEASKGGND EFIAHRPGEE  180
DAQKKNMNAN TQTGFPKAAL LLVDALKKNR ACQKFIRRKM INIEAKIEVN KDLRDRVKCL  240
MDYQYSCRRS FGKVLCQKVD PRVRLISSQK QSAQSAKNKY KMPALLLGPA ENPHVEKYKA  300
VLKQFPVSLQ KHPWSDIEKD RLAKGIKQQY QEALIKDSMK NGSSSGDFSA VDMAYALTNT  360
VGNFEATPEI LRSVLPLVNW DFIAAMYLPG RSGAECESRW LNHDDPLINH NAWTACEEKR  420
LILTVQEKGM HNWINIAVAL GTQRTPFQCL ARYQRSLNPH ILKRTWTKEE DLQLLAAVQT  480
YGCNWQLVSA NLVGRIGNQC SNRYRKTLIP ERKRVGRWSE DEDKRLMVSV KLFRSGSWNK  540
IAQFVPGRTQ SQCSERWRNV LDPDIEHGEW RPEEDSKLLA SVHEVGPCWS KIAGAMIPHR  600
TDNMCLRRWK RLCQDELPLM IAANQVKKSI FQTNFVDRET ERPAICPSDF PSLVYSKVDK  660
GDENTVSDQV KKPRKRSRKS SVDNVPPNDP SKSSADAAAV NTTKRKSRKK LSGIGAENQT  720
GEDITVSDGV NNSSRGHSRA RKRKVTTDGD VVVQTRMRGS ISVDNELTLD ILGGPISFDD  780
EAPTNQKRDP TSVGKEGTAK KRTRGSVSVG NEGPVKKKMR GSISVGDGRA VKNRMRGSVS  840
IDNQGNTTKR KRVSRKSAKG NSKTDGEVNT CEMDLPSVPS EAAAERGIDT GNTNKMKRKS  900
TPRPKLINMA EGTVDEYSRL ADCISFARGN GTSKNNST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1671679KKPRKRSRK
2799805AKKRTRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-140MYB family protein