PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047860.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 228aa    MW: 24444.3 Da    PI: 6.9656
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047860.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-0986133455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+  Er RR+ri +++  L++l+P +    +k   Ka iL + ++Y++sLq
  TRIDC5BG047860.10  86 SHSLSERVRRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 133
                        799***********************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
NPEDAAASLE GSSGVLDTPL VATASVEKKR KPKEDTASLN SAHSKETKES TRKRGGKKQG  60
KEVDEEEEEP KGYIHVRARR GQATDSHSLS ERVRRERISE RMRMLQSLVP GCDKVTGKAL  120
ILDEIINYVQ SLQNQVEFLS MRIASLSPVV YGFGMESGAA LSDQSQKIEG MFHEAAALPT  180
GPPMNRSSSP APSQAMMDTG TSSSSPPYSL QGTQDPIPKT TAAAAAAT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12861KKRKPKEDTASLNSAHSKETKESTRKRGGKKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.25e-35bHLH family protein