PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047860.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 262aa    MW: 28441.9 Da    PI: 5.699
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047860.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.51.7e-061001391255
                        HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        RR+ri +++  L++l+P +    +k   Ka iL + ++Y++sLq
  TRIDC5BG047860.11 100 RRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 139
                        9*****************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAGFSHLPQQ MEYGLTNAGS FLLCHGNPED AAASLEGSSG VLDTPLVATA SVEKKRKPKE  60
DTASLNSAHS KETKESTRKR GGKKQGKEVD EEEEEPKGVR RERISERMRM LQSLVPGCDK  120
VTGKALILDE IINYVQSLQN QVEFLSMRIA SLSPVVYGFG MESGAALSDQ SQKIEGMFHE  180
AAALPTGPPM NRSSSPAPSQ AMMDTGTSSS SPPYSLQGPN SKMISQDNGS SSSSYMMQTV  240
GEPRHELFNQ VMFSNYMCSF QQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15487KKRKPKEDTASLNSAHSKETKESTRKRGGKKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-28bHLH family protein