PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047860.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 145aa    MW: 16058 Da    PI: 8.7381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047860.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.76.4e-06112138430
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                       +h+  Er RR+ri +++  L++l+P +
  TRIDC5BG047860.5 112 SHSLSERVRRERISERMRMLQSLVPGC 138
                       799**********************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MAGFSHLPQQ MEYGLTNAGS FLLCHGNPED AAASLEGSSG VLDTPLVATA SVEKKRKPKE  60
DTASLNSAHS KETKESTRKR GGKKQGKEVD EEEEEPKGYI HVRARRGQAT DSHSLSERVR  120
RERISERMRM LQSLVPGCDK VISHW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15487KKRKPKEDTASLNSAHSKETKESTRKRGGKKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.15e-11bHLH family protein