PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG049570.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 279aa    MW: 29801.4 Da    PI: 6.0985
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG049570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.3e-12108153454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +h e+Er+RRd++N +f  Lr  +P+       +++Ka+ L  A  YI +L
  TRIDC5BG049570.1 108 SHVEAERQRRDKLNRRFCDLRAAVPTV-----SRMDKASLLADAAAYIAEL 153
                       89************************6.....49**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
DDELLSPCSS FFPVSPPSGQ FEHHHHQFIQ FASCEVPEQW LLGDVAVPAK SEDAGDLWPA  60
GSLLSTDSEI SELPAASLPA STESTPRPAA AKQRGRKPGP RPEGPTVSHV EAERQRRDKL  120
NRRFCDLRAA VPTVSRMDKA SLLADAAAYI AELRARVARL EDESKQAAAA RWDTNSGSLG  180
GGGASFQHFL AGDETVEVRM VGRDAAALRV TTAAGSAPYA PARLMSPLRS LEMQVQHACV  240
SRVQGATVQD VVVDVPAALQ HDDGAALRSA LLQRLRDSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32640.12e-16bHLH family protein