PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG049910.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 308aa MW: 31435 Da PI: 4.9192

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG049910.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	104.3	2e-32	34	110	6	83
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 r+ ++hTkv+gR+RR+R+ a+caar+ +L++eLG+++d+ ti WLlqq++pai ++tgt++ +a ++ +++ + TRIDC5BG049910.2 34 PRNRDRHTKVEGRGRRIRMAAPCAARVAQLTRELGHKTDGDTIRWLLQQSEPAIVAATGTGTVPAIAT-TVDGVLRIP 110 6899********************************************************88888444.333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
AIAVVPAAAH GPIVPKPEQA PGEFLGGLAV ALPPRNRDRH TKVEGRGRRI RMAAPCAARV 60 AQLTRELGHK TDGDTIRWLL QQSEPAIVAA TGTGTVPAIA TTVDGVLRIP TESPSAAGAD 120 GAGPASKRRK LQPTRAAGGA GPLVAAPPAA YYPVAADPLL QGNGGGGAIS VSSGLAPVSA 180 AAAPAGGHIP FFALQVPASG DGKQMVPQAA MWMVQQPPAA GGAPNHPTHY WAFQSNPAEF 240 NNFPGAQAIN VANYQQQPCY SPMQFVAAGG EPQDQQEAGD QCADADDQIQ GLEDDYDGEA 300 LTDSSSEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-37	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG049910.2