PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050040.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 243aa    MW: 26039 Da    PI: 5.3508
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050040.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.7e-1648100155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++    rWv+e+r+p   g +  r +lg++ tae Aa+a++aa+++l g
  TRIDC5BG050040.2  48 PVYRGVRRRGGACRWVCEVRVP---GrRGCRLWLGTYVTAESAARAHDAAMLALGG 100
                       68*******************9...6445***********************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
VDRQQCKMEM GSERWTSPST PTSSRDQHAA APAKRPAGRT KFKETRHPVY RGVRRRGGAC  60
RWVCEVRVPG RRGCRLWLGT YVTAESAARA HDAAMLALGG RSAACLNFPD SAWLLAVPSA  120
LADLADVRRA ALAAIAGFQR RETASCAATV PVDEVFDTSS SSSSGSWATP QPCAAADGVF  180
DVPAAALASG DMFDLELDMA GEMDLGYYYA DFAEGLLFEP PPPADDTEAW WQNGHYYDGN  240
GGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-26ERF family protein