PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050070.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 228aa    MW: 24980.6 Da    PI: 8.3384
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050070.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.7e-174192255
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++ + g+Wv+e+r+p   g k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC5BG050070.1 41 LYRGVRRRGRVGQWVCEVRVP---GiKGSRLWLGTFNTAEMAARAHDAAVLALSG 92
                      69******************9...8777*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MDVADIASRS GQQEQGHRTV SSEPPKRPAG RTKFHETRHP LYRGVRRRGR VGQWVCEVRV  60
PGIKGSRLWL GTFNTAEMAA RAHDAAVLAL SGRAACLNFA DSAWRMLPVL AAGSFGFDSA  120
REIKAAVAVA VVAFQRKQII PVAVAVVALQ QQQVPQQQQI ILPVACLAPE FYMSSVDLLE  180
LDEEQWFGGM EAGSYYASLA QGMLVAPPDE RARPEHGVQT PLWSCLFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.17e-26ERF family protein