PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050070.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 109aa    MW: 12015.8 Da    PI: 12.1787
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050070.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38e-183384255
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++ + g+Wv+e+r+p   g k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC5BG050070.3 33 LYRGVRRRGRVGQWVCEVRVP---GiKGSRLWLGTFNTAEMAARAHDAAVLALSG 84
                      69******************9...8777*********************999977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
RSGQQEQGHR TVSSEPPKRP AGRTKFHETR HPLYRGVRRR GRVGQWVCEV RVPGIKGSRL  60
WLGTFNTAEM AARAHDAAVL ALSGRAACLN FADSAWRMLP VLAAGSKRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.18e-27ERF family protein