PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050070.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 216aa    MW: 24145.6 Da    PI: 12.3763
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050070.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-173283255
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++ + g+Wv+e+r+p   g k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC5BG050070.4 32 LYRGVRRRGRVGQWVCEVRVP---GiKGSRLWLGTFNTAEMAARAHDAAVLALSG 83
                      69******************9...8777*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
SGQQEQGHRT VSSEPPKRPA GRTKFHETRH PLYRGVRRRG RVGQWVCEVR VPGIKGSRLW  60
LGTFNTAEMA ARAHDAAVLA LSGRAACLNF ADSAWRMLPV LAAGSFGFDS AREIKAAVAV  120
AVVAFQRKQI IPVAVAVVAL QQHSRSFFQS RAWRRSFTCL PSTCWSWTRS SGLAAWRPGR  180
TTRAWRRGCS WRRRTKERGR STASRRHYGA ACSTNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.14e-25ERF family protein