PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050140.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 240aa    MW: 25570.4 Da    PI: 5.13
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050140.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.2e-174193155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      + y+GVr++ + grWv+e+r+p ++g  +r +lg++ tae Aa+a +aa+++l g
  TRIDC5BG050140.2 41 PVYRGVRRRGNAGRWVCEVRVPGKRG--ARLWLGTYLTAEAAARANDAAMLALGG 93
                      68*******************95544..**********************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDLSSSSPSS SVSSTPEHAS GRASPAKRPT GRTKFRETRH PVYRGVRRRG NAGRWVCEVR  60
VPGKRGARLW LGTYLTAEAA ARANDAAMLA LGGRSARCLN FADSAWLLAV PSALSNLADV  120
RRAALQAVAD FQRREAANGL IARTVAKEAP SSAPAQSSSE SDSADSSETS EASADGEFEV  180
LATMDIDMFS RLDLFPEMDL GSYYVSLAEA LLMDPPSTAA IMDAYWDNGD GGADVALWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-30ERF family protein