PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050150.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 250aa    MW: 26435.2 Da    PI: 4.489
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050150.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-1753105155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++ +  rWv+e+r+p ++g  +r +lg+++tae Aa+a +aa+++l g
  TRIDC5BG050150.2  53 PVYRGVRRRGNAERWVCEVRVPGKRG--ARLWLGTYDTAELAARANDAAMLALGG 105
                       68*******************95544..***********************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
PSTQPVAMDM GLEVSSSSPS SSSVSSSPEH AAGRASLAKR PAGRTKFRET RHPVYRGVRR  60
RGNAERWVCE VRVPGKRGAR LWLGTYDTAE LAARANDAAM LALGGRSAAC LNFADSAWLL  120
AVPSALSDLG DVRRAAVEAV ANLQRRKAGN GSLTATVTEE ASCDAPEESS SESDSAGSSE  180
TSEPSADREF EVPVAVDTDM FGLDLFPEMD LCSYYASLAE ALLVDPPARV TTTDTYWDNG  240
DGGADVALWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-29ERF family protein