PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050190.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 224aa    MW: 24190.9 Da    PI: 4.8269
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-173787153
               AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkl 53
                      + y+GVr++ + grWv+e+r+p   g +  r +lg+f+tae Aa+a +aa+ +l
  TRIDC5BG050190.1 37 PVYRGVRRRGNAGRWVCEVRVP---GrRGSRLWLGTFDTAEAAARANDAAMIAL 87
                      68*******************9...6455*********************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
YSPSTSREHQ QAKQAAWTSA PAKRPAGRTK FRETRHPVYR GVRRRGNAGR WVCEVRVPGR  60
RGSRLWLGTF DTAEAAARAN DAAMIALSAG GAGCLNFADS AELLAVPAAS SYRSLDEVRH  120
AVVEAVEDFL RREAIAEEDA LSGTSSSAPS SLTDDESSSS PPEDSPFELD VLSDMGWDLY  180
YASLAQAMLM APPSSMAAAL GDYGEVDVPL WSYQRAPLCL YESL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.15e-27ERF family protein