PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050400.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 203aa    MW: 21958.2 Da    PI: 7.7324
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050400.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.83.2e-22122177156
                        TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
           Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                        +++ +++t++q++eLe++F+++++p++++r eL+++l+L+ rqVk+WFqNrR+++k
  TRIDC5BG050400.11 122 KKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMK 177
                        678899***********************************************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MSFGGMFDGA GSGVFSYDAG GGGPGMHNPG RLLAPPPIPR PGAGAGGGGF ASSTGLSLGL  60
TNMEGGGQLG GAFMGSTGSG GDGDSLGRAR EDENDSRSGS DNLDGASADE LDPDNSNPRK  120
KKKRYHRHTP QQIQELEAVF KECPHPDEKQ RMELSRRLNL ESRQVKFWFQ NRRTQMKTQI  180
ERHENALLRQ ENDKLRTENM TIR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119124RKKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.25e-58HD-ZIP family protein