PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050430.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 201aa    MW: 21867.3 Da    PI: 7.7843
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050430.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind82.18e-26109167260
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                       Fl+k+y+++ed++++++isw e+g++fvv+ + efa+++LpkyFkh+nf+SFvRQLn+Y
  TRIDC5BG050430.3 109 FLTKTYQLVEDPAVDDVISWGEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTY 167
                       9*********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
FISLIFIAVL LLPLGISLVI PRAKLPEGFF RTFLSLVRWP QPHLEATTGF PGPDPAGRGR  60
GGAGVMAAEH GAAAAAADRA GAEPPPPAPM PGLVASADAA GQRSLPTPFL TKTYQLVEDP  120
AVDDVISWGE DGSTFVVWRP AEFARDLLPK YFKHNNFSSF VRQLNTYVRA LDGFGWLIPR  180
ARGWDLAFLD FWRGMPMLLI L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.12e-40HSF family protein