PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 242aa    MW: 26727.6 Da    PI: 4.6335
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.5e-172667447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       T +E+ l vd++++lG++ W++Ia++++ gRt++++k++w+++
  TRIDC5BG051160.1 26 LTDDEERLVVDLHAKLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 67
                      699****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
GLLRCGKSCR LRWTNYLRPD LKRGLLTDDE ERLVVDLHAK LGNRWSKIAA KLPGRTDNEI  60
KNHWNTHIKK KLIKMGIDPI THEPLEVRKQ PQQASLSTTS AQSSTITIEC KSNNGGKSQQ  120
QDTHINRDKD ASSVGSESSP PELSGANTDN TTGGTNGIHD QDPLVKWLLE DEDDLPTIGI  180
VEEPWLDFTV ENDVDKFNSI PSAMSWDIGA TDWLLDYQDF GAGDSSLLDD ASMVDSSSGS  240
NL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.19e-51MYB family protein