PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051940.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 358aa    MW: 39889.9 Da    PI: 6.5736
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.24.7e-1261135723373
              GRAS  23 lLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHii 115
                       ++ +l++++s +gdp qRl ay++e+L arla+s++++ykal+++e +   ss+ ++++++++e++P++kf+++ aN aI eav+ge+++Hii
  TRIDC5BG051940.1  11 MVPELRKMVSVSGDPHQRLGAYIVEGLVARLASSGHSIYKALKCKEPR---SSDLMSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDMIHII 100
                       67799******************************************9...999*************************************** PP

              GRAS 116 DfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnl 206
                       Df+isqG+QW++LlqaLa+Rp+gpp++RiTg++++ s   +   l  +g+rL+++A  ++vpfef+  va + +++e e+L v pgEalaVn+
  TRIDC5BG051940.1 101 DFGISQGAQWIPLLQALATRPGGPPTVRITGIDDSLSAyaRGGGLDLVGRRLSHIAGLCKVPFEFHS-VAVAGDEVEEEHLMVIPGEALAVNF 192
                       **********************************877788999************************.7999********************* PP

              GRAS 207 vlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299
                        l+lh+++de vs++++rd++L+lvkslsPkvv++veqe+++n+ +F +rf+e+l+yy+a+f+s++ +lpr+ ++ri +E+++l+reivn+va
  TRIDC5BG051940.1 193 TLELHHIPDEAVSTANHRDRILRLVKSLSPKVVTLVEQELNTNTVPFKQRFAETLDYYTAIFESIDLTLPRD-DKRIDMEQHCLAREIVNIVA 284
                       *********************************************************************886.679***************** PP

              GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       cegaer+erhe ++kW+ rl+++GF+p pls+ +++++++ll+ ++ + y++ e++g l+lgWk++pLv+ SaW
  TRIDC5BG051940.1 285 CEGAERVERHEVFGKWKGRLMMVGFRPWPLSSLVNATIRTLLQSYSAN-YQLAERDGVLYLGWKNKPLVVSSAW 357
                       **********************************************77.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
DVIPGFPSDM MVPELRKMVS VSGDPHQRLG AYIVEGLVAR LASSGHSIYK ALKCKEPRSS  60
DLMSYMHFLY EACPYFKFGY MSANGAIAEA VKGEDMIHII DFGISQGAQW IPLLQALATR  120
PGGPPTVRIT GIDDSLSAYA RGGGLDLVGR RLSHIAGLCK VPFEFHSVAV AGDEVEEEHL  180
MVIPGEALAV NFTLELHHIP DEAVSTANHR DRILRLVKSL SPKVVTLVEQ ELNTNTVPFK  240
QRFAETLDYY TAIFESIDLT LPRDDKRIDM EQHCLAREIV NIVACEGAER VERHEVFGKW  300
KGRLMMVGFR PWPLSSLVNA TIRTLLQSYS ANYQLAERDG VLYLGWKNKP LVVSSAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-170GRAS family protein