PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051950.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 469aa    MW: 52199.6 Da    PI: 6.3842
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051950.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4125.6e-126994681373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++lL++cA+av+++d  +++ ++  l +++s +g+p+qRl  y++e+L +rla+s++++ykal+ ++ +     e++++++ ++ v+P+lk
  TRIDC5BG051950.10  99 LKKLLMSCARAVDEKDSLAIDMTVPVLGKNVSVSGKPLQRLGEYMVEGLVTRLASSGHSIYKALKWQKPN---GCEVISYQRELYAVCPYLK 187
                        5799*************************************************************99998...9****************** PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++  N aI eav ge+++HiiDf isqG+QW++L+qaLa+Rp+gpp++RiT ++++es   +   le +g+ L+++A+e+ +pfef++l 
  TRIDC5BG051950.10 188 FGYVSPNGAIAEAVRGEDMIHIIDFRISQGVQWISLIQALAARPGGPPTVRITCIDDSESAyaRGGGLEILGNTLSDIAREFALPFEFHAL- 278
                        *********************************************************998899999************************6. PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                          +++++e  +L v pgEa+aVn+ l lh+++desvs +++rd++L+lvk+lsPkvv++veqe+++n+++F++rf+e+l+ y+a+f+s++++
  TRIDC5BG051950.10 279 DISVSEVEEGHLGVIPGEAVAVNFNLTLHQIPDESVSAANHRDRILRLVKRLSPKVVTFVEQELNTNTGPFMQRFTETLDKYTAIFESIDVE 370
                        6689**************************************************************************************** PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                         pre +er+k+E+ +l+reivn+vacegaer+erhe ++kW+ rl+++GF+p pls+ +++++++ll+ ++ + y++ e++g l+lgWk++p
  TRIDC5BG051950.10 371 RPREPKERTKMEQYCLAREIVNIVACEGAERVERHEVFGKWKGRLTMVGFRPWPLSSLVNATIRTLLQSYSAN-YQLAERDGVLYLGWKNKP 461
                        ***********************************************************************77.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG051950.10 462 LVVSSAW 468
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MPNLQKLKLG FNAPRPRIDQ HGASTAISIG HLPGLREIYA KIRGACADAE SALATAISNH  60
PSNPRISVQL VDYTFDDDEI THDKNEQDEV VEEDRGGYLK KLLMSCARAV DEKDSLAIDM  120
TVPVLGKNVS VSGKPLQRLG EYMVEGLVTR LASSGHSIYK ALKWQKPNGC EVISYQRELY  180
AVCPYLKFGY VSPNGAIAEA VRGEDMIHII DFRISQGVQW ISLIQALAAR PGGPPTVRIT  240
CIDDSESAYA RGGGLEILGN TLSDIAREFA LPFEFHALDI SVSEVEEGHL GVIPGEAVAV  300
NFNLTLHQIP DESVSAANHR DRILRLVKRL SPKVVTFVEQ ELNTNTGPFM QRFTETLDKY  360
TAIFESIDVE RPREPKERTK MEQYCLAREI VNIVACEGAE RVERHEVFGK WKGRLTMVGF  420
RPWPLSSLVN ATIRTLLQSY SANYQLAERD GVLYLGWKNK PLVVSSAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-167GRAS family protein