PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051980.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 278aa    MW: 30872.5 Da    PI: 6.5119
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051980.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS337.82e-103227797373
              GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                        aN aI eav+ge+++HiiDf+isqG+QW++LlqaL +Rp+gpp++RiTg++++ s   +   l  +g+rL+++A  ++vpfef+  va + +
  TRIDC5BG051980.7   2 SANGAIAEAVKGEDMIHIIDFGISQGAQWIPLLQALVTRPGGPPTVRITGIDDSLSAyaRGGGLDLVGRRLSHIAGLCKVPFEFHS-VAVAGD 93 
                       79***************************************************877788999************************.7999** PP

              GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                       ++e  +L v pgEalaVn+ l+lh+++de vs++++rd++L+lvkslsPkvv++veqe+++n+ +F +rf+e+l+yy+a+f+s++ +lpr+ +
  TRIDC5BG051980.7  94 EVEEGHLMVIPGEALAVNFTLELHHIPDEAVSTANHRDRILRLVKSLSPKVVTLVEQELNTNTVPFKQRFTETLDYYTAIFESIDLTLPRD-D 185
                       ****************************************************************************************886.6 PP

              GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       +ri++E+++l+reivn+vacegaer+erhe ++kW+ rl+++GF+p pls+ +++++++ll+ ++ + y++ e++g l+lgWk++pLv+ SaW
  TRIDC5BG051980.7 186 KRINMEQHCLAREIVNIVACEGAERVERHEVFGKWKGRLMMVGFRPWPLSSLVNATIRTLLQSYSAN-YQLAERDGVLYLGWKNKPLVVSSAW 277
                       79***************************************************************77.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MSANGAIAEA VKGEDMIHII DFGISQGAQW IPLLQALVTR PGGPPTVRIT GIDDSLSAYA  60
RGGGLDLVGR RLSHIAGLCK VPFEFHSVAV AGDEVEEGHL MVIPGEALAV NFTLELHHIP  120
DEAVSTANHR DRILRLVKSL SPKVVTLVEQ ELNTNTVPFK QRFTETLDYY TAIFESIDLT  180
LPRDDKRINM EQHCLAREIV NIVACEGAER VERHEVFGKW KGRLMMVGFR PWPLSSLVNA  240
TIRTLLQSYS ANYQLAERDG VLYLGWKNKP LVVSSAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-127GRAS family protein