PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG052680.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 359aa MW: 41915 Da PI: 7.4898

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG052680.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.6	7.8e-22	37	117	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YA +vGFsvrks++k++ +++i ++ vCs+eg+re++++k +trtgC+a+++ + +kdg w v+kl +eHnH la TRIDC5BG052680.1 37 DMYNAYAAKVGFSVRKSHTKRR-GDKSISQKYIVCSNEGHRETQSSK--------DTTRTGCEARIQFSVSKDGIWTVQKLITEHNHYLA 117 58************998776.8888**********998776........99****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
QVRVEKRDPS QAIDKVGETL IVPEVGLAFD SEDSAYDMYN AYAAKVGFSV RKSHTKRRGD 60 KSISQKYIVC SNEGHRETQS SKDTTRTGCE ARIQFSVSKD GIWTVQKLIT EHNHYLASPN 120 KVHKLRSQRR VIEADRHLIG QIREAGMKPS QVYDFMVAFY GGPDKVPFSK MDCNNEIGRE 180 RKKYLESNDA QTLLEYLKNK QREDPTFFYA IQIDQVDGQI ANFFWADDRS EFYFNKKWFE 240 LLDQYNLEDN EWMKKLYELR EKWAAVYRDS FTADMNSTQR SEECEKVSGS LRENELDADF 300 SSRRKKPVAY SPNFPLLKTA SESYTRRMYS EFETEFKSQF SFSCKLLQTD GPVLTYMVT

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

QVRVEKRDPS QAIDKVGETL IVPEVGLAFD SEDSAYDMYN AYAAKVGFSV RKSHTKRRGD  60
KSISQKYIVC SNEGHRETQS SKDTTRTGCE ARIQFSVSKD GIWTVQKLIT EHNHYLASPN  120
KVHKLRSQRR VIEADRHLIG QIREAGMKPS QVYDFMVAFY GGPDKVPFSK MDCNNEIGRE  180
RKKYLESNDA QTLLEYLKNK QREDPTFFYA IQIDQVDGQI ANFFWADDRS EFYFNKKWFE  240
LLDQYNLEDN EWMKKLYELR EKWAAVYRDS FTADMNSTQR SEECEKVSGS LRENELDADF  300
SSRRKKPVAY SPNFPLLKTA SESYTRRMYS EFETEFKSQF SFSCKLLQTD GPVLTYMVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-39	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG052680.1