PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG053620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 381aa MW: 42980.4 Da PI: 6.6263

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG053620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.3	1e-51	17	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +pGfrFhPtdeelv++yLk+k+++k++++ e i+++diyk++PwdLpk ++++e++wyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s TRIDC5BG053620.1 17 MPGFRFHPTDEELVSFYLKNKIQQKPISI-ELIRQLDIYKFDPWDLPKLASTGETDWYFYCPRDRKYRNSARPNRVTAAGFWKATGTDRPIYS 108 69*************************.89***********88888999********************************** PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +glkk+Lvfy+gra +g ktdW+mhe+rl TRIDC5BG053620.1 109 SeGTRCIGLKKSLVFYRGRAARGIKTDWMMHEFRL 143 856667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEGINDVNMD KSDEIIMPGF RFHPTDEELV SFYLKNKIQQ KPISIELIRQ LDIYKFDPWD 60 LPKLASTGET DWYFYCPRDR KYRNSARPNR VTAAGFWKAT GTDRPIYSSE GTRCIGLKKS 120 LVFYRGRAAR GIKTDWMMHE FRLPSLTDPS LPKRPIDKNI PLNDSWTICK IFKKTSSMAQ 180 QMALSHTWGP PLPGTTEQDL FSAMQPVQAS HFASESSSRS LQVAEAPASQ FNSKHGFQGQ 240 QQLQKPSNTQ DGSSCKVISF NCNPSLELEG PTILPFQTQP SQKPEHTAPP LFNMQFGQPE 300 QQITGFLADS SADVNVGMSS RNQDSSTMKH GNTFSMNNEL DAPGRLNFPF DLGADSLDDW 360 KCNIPWESFL SPTVPAEMPQ Y

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEGINDVNMD KSDEIIMPGF RFHPTDEELV SFYLKNKIQQ KPISIELIRQ LDIYKFDPWD  60
LPKLASTGET DWYFYCPRDR KYRNSARPNR VTAAGFWKAT GTDRPIYSSE GTRCIGLKKS  120
LVFYRGRAAR GIKTDWMMHE FRLPSLTDPS LPKRPIDKNI PLNDSWTICK IFKKTSSMAQ  180
QMALSHTWGP PLPGTTEQDL FSAMQPVQAS HFASESSSRS LQVAEAPASQ FNSKHGFQGQ  240
QQLQKPSNTQ DGSSCKVISF NCNPSLELEG PTILPFQTQP SQKPEHTAPP LFNMQFGQPE  300
QQITGFLADS SADVNVGMSS RNQDSSTMKH GNTFSMNNEL DAPGRLNFPF DLGADSLDDW  360
KCNIPWESFL SPTVPAEMPQ Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-94	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG053620.1