PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG055970.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 275aa    MW: 30822.2 Da    PI: 4.7196
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG055970.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.31.4e-5361441128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtdeelv++yLk+k++g ++el ++i+evd+yk+ePwdL  k  + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++
  TRIDC5BG055970.2   6 LPPGFRFHPTDEELVNYYLKRKIHGLHIEL-DIIPEVDLYKCEPWDLAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRR 97 
                       79****************************.99**************84335556888*********************************** PP

               NAM  92 vlsk..........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       v+++          + +++g+kktLv+y+grap+g++tdWvmheyrl
  TRIDC5BG055970.2  98 VMTQqhhggggaggGARAIGMKKTLVYYRGRAPQGVRTDWVMHEYRL 144
                       ***866666555554455***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MAPVGLPPGF RFHPTDEELV NYYLKRKIHG LHIELDIIPE VDLYKCEPWD LAEKSFLPSR  60
DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVMT QQHHGGGGAG GGARAIGMKK  120
TLVYYRGRAP QGVRTDWVMH EYRLDDKDSE DTIAIQLYSD ETNIVCINFQ ERDTYALCRV  180
FKKNAICAEV EELQEGQCSM ALLEGACQQL LAGSRTTGQE YYQTPSPDVP AGSTSGGADA  240
DADDDADKDD SWMQFISEDA WCSSTAAEES TSCAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-108NAC family protein