PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG055980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 245aa    MW: 28421.7 Da    PI: 6.7655
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG055980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.51.5e-54341611128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtdeelv++yLk+kv+g+++el ++i+evd+yk+ePw+L  k  + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++
  TRIDC5BG055980.1  34 LPPGFRFHPTDEELVNYYLKRKVHGQSIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGCRTNRATRAGYWKSTGKDRS 125
                       79****************************.99**************84335556888*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +   +++ +g+kktLvfy+grap+g +++Wvmheyr+
  TRIDC5BG055980.1 126 INY-QKRSIGMKKTLVFYQGRAPQGIRSNWVMHEYRI 161
                       **9.9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
QKLDTVGKDK GERQRERSAT KEEANQEIMA PVGLPPGFRF HPTDEELVNY YLKRKVHGQS  60
IELDIIPEVD LYKCEPWELA EKSFLPSRDP EWYFFGPRDR KYPNGCRTNR ATRAGYWKST  120
GKDRSINYQK RSIGMKKTLV FYQGRAPQGI RSNWVMHEYR IEESECNNTM GVQDSYALCR  180
VFKKNVPAGE FEKQGECSSS QAKGNQEQVT EFEDAGESST ANENDKDNSW MQFIVEDLWC  240
SNKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-111NAC family protein