PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG056870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 90aa    MW: 9747.88 Da    PI: 8.243
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG056870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.92.6e-082289153
          trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...............rergferspkqCkek 53
                      +W+++ +  L+ea++ ++   +r+klk  +W +++  +               +++g  ++p+qCk+k
  TRIDC5BG056870.1 22 EWSESGISRLLEAYEAKWLLRNRAKLKWSDWVDIAHDVsahcsssdhaskpgaAAGGTAKTPNQCKNK 89
                      5*****************************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MDGLPDAAPP APAPQQQPKR DEWSESGISR LLEAYEAKWL LRNRAKLKWS DWVDIAHDVS  60
AHCSSSDHAS KPGAAAGGTA KTPNQCKNKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.14e-17Trihelix family protein