PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG056930.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 126aa MW: 13238.7 Da PI: 8.7686

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG056930.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00019	23	45	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H TRIDC5BG056930.1 23 FSCNYCHRKFFSSQALGGHQNAH 45 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence
HEQRGARRPP TPVALDQAGK EAFSCNYCHR KFFSSQALGG HQNAHKLERT LAKRSRDADA 60 TAAATATPSS HWLHGGGREL WAYSASAAAP DSTTMTPMVG MGWAGTGSTT AAGGESAPEM 120 DLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	5e-18	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG056930.1