PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG056930.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 200aa MW: 21870.8 Da PI: 10.2343

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG056930.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	97	119	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H TRIDC5BG056930.2 97 FSCNYCHRKFFSSQALGGHQNAH 119 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
RPPPPRHSLC FFFFIDTHTP PRPQLRRPPA RTQYLRPKCR ACLLRPSTME REAPQPHQLL 60 LHGVSLDLRL DTATHEQRGA RRPPTPVALD QAGKEAFSCN YCHRKFFSSQ ALGGHQNAHK 120 LERTLAKRSR DADATAAATA TPSSHWLHGG GRELWAYSAS AAAPDSTTMT PMVGMGWAGT 180 GSTTAAGGES APEMDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	5e-17	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG056930.2