PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG057240.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 395aa MW: 43590.8 Da PI: 5.7153

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG057240.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.4	1.1e-12	30	111	13	99
TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++l++p + ++ +++ + s ++le+++gr+++vk+ k g+++lt+GW++Fv+an+++e+ ++F + g+s+f +v++f++ TRIDC5BG057240.2 30 KDQLCIPWEVSSKLrDMI-PDSEPIKLETPDGRTYSVKF---VKFGQITLTTGWRGFVDANHIEENNPMLFVYRGNSTF--NVHIFNS 111 567999999988887333.35567*************...6667899**********************999999..9999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
CEEWGRYCYW NHDHGDGRPM QFLLFASDDK DQLCIPWEVS SKLRDMIPDS EPIKLETPDG 60 RTYSVKFVKF GQITLTTGWR GFVDANHIEE NNPMLFVYRG NSTFNVHIFN SSGHDKSLPC 120 SQPPCDHHVL NEQVVPHPGH VDSSAHFGYT MLPGSSVTKA QDDKLLEWAH TIKSGFPLFV 180 AAMDESNVSL NDCHVYIPLS LVGQFKEEVV KIVAPDGSEY GVGAKKHNDD QIVLQSGWDK 240 FVASQCIQQN DLLIFIIEGE ARLKVLVLDP SGSEKTFAMG NSSNAQEKQP LPPTVTNLSS 300 EDNEVTDLSS AYDEVVGKDT TTSRREQRPL RSCRVEAEKM GSTSCPSTKS GHKAGNSNEA 360 GIEAPMPNKS YIVPKSGRSA RAFGLGSRSL QLGPS

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

CEEWGRYCYW NHDHGDGRPM QFLLFASDDK DQLCIPWEVS SKLRDMIPDS EPIKLETPDG  60
RTYSVKFVKF GQITLTTGWR GFVDANHIEE NNPMLFVYRG NSTFNVHIFN SSGHDKSLPC  120
SQPPCDHHVL NEQVVPHPGH VDSSAHFGYT MLPGSSVTKA QDDKLLEWAH TIKSGFPLFV  180
AAMDESNVSL NDCHVYIPLS LVGQFKEEVV KIVAPDGSEY GVGAKKHNDD QIVLQSGWDK  240
FVASQCIQQN DLLIFIIEGE ARLKVLVLDP SGSEKTFAMG NSSNAQEKQP LPPTVTNLSS  300
EDNEVTDLSS AYDEVVGKDT TTSRREQRPL RSCRVEAEKM GSTSCPSTKS GHKAGNSNEA  360
GIEAPMPNKS YIVPKSGRSA RAFGLGSRSL QLGPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-11	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG057240.2